Home - About - Screenshots - Tutorial - FAQ - Mailing list - What's new

---

Publication name:	Causton_stress
Title:	Remodeling of Yeast Genome Expression in Response to Environmental Changes.
Authors:	Causton HC, Ren B, Koh SS, Harbison CT, Kanin E, Jennings EG, Lee TI, True HL, Lander ES, Young RA
Ref:	"Mol Biol Cell 2001 Feb;12(2):323-337"
Links:	Publication website Medline On line article
Experiments: 32	Organism: Budding yeast (Saccharomyces cerevisiae)
Slide type:	microarrays oligos
Comment:
Condition Green Red Ratio min Ratio max log2 avg Std dev ORFs measured -3 fold -2 fold -1.5 fold +1.5 fold +2 fold +3 fold log2(ratio) distrib salt 15min Time 0 saline stress, 15min exposure 0.01 89.00 -0.72 0.96 4928 1114 1114 2840 274 97 46 salt 30min Time 0 saline stress, 30min exposure 0.01 92.00 0.09 1.47 5157 713 713 1494 1720 843 488 salt 45min Time 0 saline stress, 45min exposure 0.01 97.00 0.11 1.58 5072 771 771 1474 1851 933 556 salt 60min Time 0 saline stress, 60min exposure 0.01 97.00 0.08 1.25 4815 521 521 1198 1468 572 295 salt 120min Time 0 saline stress, 120min exposure 0.01 85.00 -0.35 1.38 4778 958 958 1905 976 396 222 peroxide 10min Time 0 oxydative shock, 10min exposure 0.05 93.00 -0.40 1.06 4677 691 691 2052 576 227 141 peroxide 20min Time 0 oxydative shock, 20min exposure 0.02 57.00 -0.67 1.28 4731 1363 1363 2677 562 275 169 peroxide 40min Time 0 oxydative shock, 40min exposure 0.02 93.00 -0.44 1.45 4998 1166 1166 2219 977 438 261 peroxide 60min Time 0 oxydative shock, 60min exposure 0.01 88.00 -0.28 1.43 4985 934 934 1865 1166 509 288 peroxide 120min Time 0 oxydative shock, 120min exposure 0.09 24.00 -0.22 0.70 4554 185 185 1302 378 84 42 sorbitol 15min Time 0 osmotic shock, 15min exposure 0.01 87.00 -0.84 1.30 4778 1567 1567 2943 466 202 135 sorbitol 30min Time 0 osmotic shock, 30min exposure 0.01 93.00 -0.05 1.44 4834 761 761 1520 1406 622 361 sorbitol 45min Time 0 osmotic shock, 45min exposure 0.01 89.00 0.39 1.23 4884 326 326 830 2132 883 459 sorbitol 60min Time 0 osmotic shock, 60min exposure 0.01 31.00 -0.00 0.81 4706 233 233 840 939 148 53 sorbitol 120min Time 0 osmotic shock, 120min exposure 0.01 46.00 0.13 0.79 4856 144 144 624 1162 241 95 heat 60min Time 0 heat shock, 60min exposure 0.10 73.00 0.55 0.87 4911 97 97 320 2421 767 300 heat 15min Time 0 heat shock, 15min exposure 0.07 95.00 0.46 1.04 5053 139 139 609 2184 774 363 heat 30min Time 0 heat shock, 30min exposure 0.10 36.00 0.75 0.88 4919 47 47 183 2887 1052 483 heat 45min Time 0 heat shock, 45min exposure 0.07 60.00 0.74 0.82 4953 52 52 169 3031 1020 378 heat 120min Time 0 heat shock, 120min exposure 0.05 99.00 0.65 0.83 5076 38 38 187 2704 898 376 alkali 10min Time 0 alkali shock, 10min exposure 0.03 81.00 0.32 1.18 4705 311 311 836 1857 724 377 alkali 20min Time 0 alkali shock, 20min exposure 0.02 55.00 -0.17 1.06 4573 505 505 1402 884 278 143 alkali 40min Time 0 alkali shock, 40min exposure 0.05 66.00 -0.25 0.87 4806 390 390 1633 589 163 82 alkali 60min Time 0 alkali shock, 60min exposure 0.03 42.00 -0.17 0.90 4618 362 362 1362 705 202 103 alkali 80min Time 0 alkali shock, 80min exposure 0.08 23.00 -0.01 0.76 4851 139 139 938 817 215 98 alkali 100min Time 0 alkali shock, 100min exposure 0.08 25.00 0.12 0.79 4823 112 112 683 1090 286 134 acid 10min Time 0 acid shock, 10min exposure 0.04 28.00 0.21 0.82 4819 101 101 573 1320 334 163 acid 20min Time 0 acid shock, 20min exposure 0.05 39.00 0.06 0.75 4902 111 111 703 872 225 106 acid 40min Time 0 acid shock, 40min exposure 0.07 35.00 -0.02 0.66 4868 120 120 724 627 135 50 acid 60min Time 0 acid shock, 60min exposure 0.07 30.00 0.25 0.62 4928 34 34 205 1295 190 70 acid 80min Time 0 acid shock, 80min exposure 0.07 11.00 -0.05 0.55 4916 63 63 673 418 70 33 acid 100min Time 0 acid shock, 100min exposure 0.01 17.00 0.10 0.62 4859 68 68 401 852 126 53

---

this script was last updated: 05/09/2003